| Urquhart Lake | Benewah, ID | 6.4 miles | NW |
| Theriault Lake | Shoshone, ID | 11.1 miles | SE |
| Crystal Lake | Benewah, ID | 11.6 miles | NW |
| Mirror Lake | Kootenai, ID | 14.3 miles | NW |
| Turtle Lake | Benewah, ID | 14.4 miles | NW |
| Elsie Lake | Shoshone, ID | 14.8 miles | NE |
| Fish Lake | Shoshone, ID | 15.8 miles | SE |
| Crow Lake | Shoshone, ID | 16.7 miles | SE |
| Lost Lake | Shoshone, ID | 17.3 miles | NE |
| Lost Lake | Shoshone, ID | 17.4 miles | SE |
| Porrett Lake | Benewah, ID | 17.8 miles | NW |
| Little Lost Lake | Shoshone, ID | 18.3 miles | SE |
| Cedar Lake | Shoshone, ID | 18.6 miles | NE |
| Crater Lake | Shoshone, ID | 18.7 miles | SE |
| Goose Heaven Lake | Benewah, ID | 22.4 miles | NW |
| Medicine Lake | Kootenai, ID | 22.8 miles | NW |
| Beaver Ponds | Benewah, ID | 23.1 miles | SW |
| Benewah Lake | Benewah, ID | 23.2 miles | NW |
| Porters lake | Kootenai, ID | 23.2 miles | NW |
| Cave Lake | Kootenai, ID | 23.6 miles | NW |
| Rose Lake | Kootenai, ID | 23.8 miles | NW |
| Lone Lake | Shoshone, ID | 24 miles | NE |
| Upper Stevens Lake | Shoshone, ID | 24.2 miles | NE |
| Lower Stevens Lake | Shoshone, ID | 24.6 miles | NE |
| Killarney Lake | Kootenai, ID | 24.7 miles | NW |
| Upper Saint Regis Lake | Mineral, MT | 24.8 miles | NE |
| Swan Lake | Kootenai, ID | 24.9 miles | NW |
| Saint Regis Lake | Mineral, MT | 25 miles | NE |
| Round Lake | Benewah, ID | 25.1 miles | NW |
| Steamboat Lake | Shoshone, ID | 25.5 miles | SE |
| Noseeum Lake | Shoshone, ID | 26 miles | SE |
| No-see-um Lake | Shoshone, ID | 26.2 miles | SE |
| Big Talk Lake | Shoshone, ID | 26.4 miles | SE |
| Chatcolet Lake | Benewah, ID | 26.5 miles | NW |
| Copper Lake | Mineral, MT | 26.5 miles | NE |
| Hidden Lake | Benewah, ID | 27.1 miles | NW |
| Blue Lake | Kootenai, ID | 27.6 miles | NW |
| Dismal Lake | Shoshone, ID | 28.8 miles | SE |
| Lower Glidden Lake | Shoshone, ID | 28.9 miles | NE |
| Anderson Lake | Kootenai, ID | 29.1 miles | NW |
| Upper Glidden Lake | Shoshone, ID | 29.4 miles | NE |
| Pear Lake | Sanders, MT | 29.6 miles | NE |
| Blossom Lakes | Sanders, MT | 29.9 miles | NE |
| Harrison Slough | Kootenai, ID | 30.1 miles | NW |
| Revett Lake | Shoshone, ID | 30.2 miles | NE |
| Evans Lake | Sanders, MT | 31.1 miles | NE |
| Silver Lake | Mineral, MT | 31.1 miles | NE |
| Devils Lake | Shoshone, ID | 33.9 miles | SE |
| Blue Lake | Shoshone, ID | 34.8 miles | SE |
| Beaver Lake | Sanders, MT | 35.1 miles | NE |
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